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2012/11/27

Nature Neuroscience Contents: December 2012 Volume 15 Number 12, pp 1605 - 1757

Nature Neuroscience

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TABLE OF CONTENTS

December 2012 Volume 15, Issue 12

News and Views
Review
Brief Communications
Articles
Technical Reports

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News and Views

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Neural embedding of stress reactivity   pp1605 - 1607
Ryan Bogdan and Ahmad R Hariri
doi:10.1038/nn.3270
A report in this issue of Nature Neuroscience demonstrates that stress in infancy leading to altered cortisol levels in childhood culminates in vulnerability to dysregulated affect in adolescent girls by biasing the functional dynamics of core neural regions mediating the generation and regulation of emotional responsiveness.

See also: Article by Burghy et al.

Breathless without Hox   pp1607 - 1609
Valerie Castellani and Artur Kania
doi:10.1038/nn.3272
Sustained activity of Hox5 transcription factors is needed for the development and maintenance of motor neurons that innervate the diaphragm, reports a study in Nature Neuroscience.

See also: Article by Philippidou et al.

Neuroligins help dendrites keep up with the Joneses   pp1609 - 1611
Stephanie L Barrow and A Kimberley McAllister
doi:10.1038/nn.3271
A study reconciling contradictory in vitro and in vivo data on neuroligins in synapse formation shows that cell-to-cell variability in neuroligin-1 levels, mediating competition for presynaptic inputs, regulates synapse density.

See also: Article by Kwon et al.

New neurons retire early   pp1611 - 1612
Timothy J Schoenfeld and Elizabeth Gould
doi:10.1038/nn.3268
Using a new retrovirus-optogenetics technique, researchers have found that new neurons in the adult hippocampus are important for memory, but only at an immature stage, when they show enhanced synaptic plasticity.

See also: Article by Gu et al.

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Review

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Neurogenesis and generalization: a new approach to stratify and treat anxiety disorders   pp1613 - 1620
Mazen A Kheirbek, Kristen C Klemenhagen, Amar Sahay and René Hen
doi:10.1038/nn.3262
In this review, the authors examine the link between adult hippocampal neurogenesis and anxiety and depression. They propose that impaired pattern separation underlies the overgeneralization often seen in anxiety disorders.

Brief Communications

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Impaired adult myelination in the prefrontal cortex of socially isolated mice   pp1621 - 1623
Jia Liu, Karen Dietz, Jacqueline M DeLoyht, Xiomara Pedre, Dipti Kelkar, Jasbir Kaur, Vincent Vialou, Mary Kay Lobo, David M Dietz, Eric J Nestler, Jeffrey Dupree and Patrizia Casaccia
doi:10.1038/nn.3263
In this study, the authors show that subjecting adult animals to prolonged social isolation results in impaired heterochromatin formation in oligodendrocytes and decreased myelin thickness, specifically in the prefrontal cortex. This suggests that social experience can regulate myelin plasticity in the adult via an epigenetic program.

Subcellular connectivity underlies pathway-specific signaling in the nucleus accumbens   pp1624 - 1626
Andrew F MacAskill, Justin P Little, John M Cassel and Adam G Carter
doi:10.1038/nn.3254
The authors report that medium spiny neurons in the mouse nucleus accumbens receive inputs from the cortex, thalamus and hippocampus, but the differential subcellular connectivity of hippocampal inputs makes them much weaker onto neurons in the indirect pathway.

Articles

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BCL6 controls neurogenesis through Sirt1-dependent epigenetic repression of selective Notch targets   pp1627 - 1635
Luca Tiberi, Jelle van den Ameele, Jordane Dimidschstein, Julie Piccirilli, David Gall, Adèle Herpoel, Angéline Bilheu, Jerome Bonnefont, Michelina Iacovino, Michael Kyba, Tristan Bouschet and Pierre Vanderhaeghen
doi:10.1038/nn.3264
The authors show that the oncogene Bcl6 is necessary for proper cortical neurogenesis in vivo and from embryonic stem cells. BCL6 alters the composition of Notch-dependent transcriptional complexes at the Hes5 promoter, including the recruitment of Sirt1, to promote transition to a neurogenic fate despite active Notch signaling.

Sustained Hox5 gene activity is required for respiratory motor neuron development   pp1636 - 1644
Polyxeni Philippidou, Carolyn M Walsh, Josée Aubin, Lucie Jeannotte and Jeremy S Dasen
doi:10.1038/nn.3242
In this study, the authors show that Hox5 genes are essential for the organization, survival and axonal branching of motor neurons required for breathing. Unexpectedly, this requirement for Hox5 activity persists to later developmental stages.

See also: News and Views by Castellani & Kania

A chemical genetic approach reveals distinct EphB signaling mechanisms during brain development   pp1645 - 1654
Michael J Soskis, Hsin-Yi Henry Ho, Brenda L Bloodgood, Michael A Robichaux, Athar N Malik, Bulent Ataman, Alex A Rubin, Janine Zieg, Chao Zhang, Kevan M Shokat, Nikhil Sharma, Christopher W Cowan and Michael E Greenberg
doi:10.1038/nn.3249
The EphB family of receptor tyrosine kinases can signal bidirectionally and functions in a kinase-dependent and kinase-independent manner. To determine the importance of the kinase activity of EphBs for axonal guidance and synaptogenesis, the authors used a chemical genetic method and generated knock-in mice that allow the kinase activity of EphBs to be inhibited without altering kinase-independent functions of EphBs. They find that specific inhibition of EphB kinase activity had no effect on synaptogenesis, but impaired axonal guidance, thereby implicating the kinase function of EphB in one neuronal process, but not other processes that are nevertheless dependent on EphBs.

GKAP orchestrates activity-dependent postsynaptic protein remodeling and homeostatic scaling   pp1655 - 1666
Seung Min Shin, Nanyan Zhang, Jonathan Hansen, Nashaat Z Gerges, Daniel T S Pak, Morgan Sheng and Sang H Lee
doi:10.1038/nn.3259
Ubiquitin proteasome system-mediated, neuronal activity-dependent protein turnover at synapses often occurs in an ensemble fashion where a group or groups of postsynaptic density (PSD) proteins are degraded together in a homeostatic response. This study shows that the synaptic level of the PSD scaffolding protein called GKAP (also known as SAPAP1) is bidirectionally regulated in a homeostatic fashion and is mediated by differential phosphorylation by CaM kinase II isoforms.

Neuroligin-1-dependent competition regulates cortical synaptogenesis and synapse number   pp1667 - 1674
Hyung-Bae Kwon, Yevgenia Kozorovitskiy, Won-Jong Oh, Rui T Peixoto, Nazia Akhtar, Jessica L Saulnier, Chenghua Gu and Bernardo L Sabatini
doi:10.1038/nn.3256
The function of neuroligins in regulating synapse formation remains controversial. Here, the authors show that neuroligin-1 (NL1) regulates activity-dependent synaptogenesis and mature synapse number on cortical layer 2/3 pyramidal neurons in vivo. They find that relative differences in transcellular expression of NL1, rather than absolute expression levels, regulate synapse number.

See also: News and Views by Barrow & McAllister

PDF-1 neuropeptide signaling modulates a neural circuit for mate-searching behavior in C. elegans    pp1675 - 7682
Arantza Barrios, Rajarshi Ghosh, Chunhui Fang, Scott W Emmons and Maureen M Barr
doi:10.1038/nn.3253
In worms, male exploratory behavior is influenced by two competing needs, food and sex. In this paper, the authors highlight the importance of the pigment dispersing factor signaling pathway in the normal function of a gender-shared neuronal circuit that is involved male-specific reproductive drive.

Orthogonal micro-organization of orientation and spatial frequency in primate primary visual cortex   pp1683 - 1690
Ian Nauhaus, Kristina J Nielsen, Anita A Disney and Edward M Callaway
doi:10.1038/nn.3255
In this study, the authors used two-photon imaging in macaque monkey to show that orientation and spatial frequency maps are intimately related at a fine spatial scale. They find that the map gradients have a striking tendency toward orthogonality and co-vary negatively from cell to cell at the spatial scale of cortical columns.

Correlated input reveals coexisting coding schemes in a sensory cortex   pp1691 - 1699
Luc Estebanez, Sami El Boustani, Alain Destexhe and Daniel E Shulz
doi:10.1038/nn.3258
Here the authors investigate the neural basis of coherence and contrast detection in the somatosensory system. Model-based analysis of the responses of neurons in the barrel cortex reveal different coding schemes according to the level of correlation in the spatiotemporal patterns of whisker stimulation. The cell populations they find in the primary somatosensory cortex are analogous to cell classes previously reported in two separate cortical areas of the visual system.

Optical controlling reveals time-dependent roles for adult-born dentate granule cells   pp1700 - 1706
Yan Gu, Maithe Arruda-Carvalho, Jia Wang, Stephen R Janoschka, Sheena A Josselyn, Paul W Frankland and Shaoyu Ge
doi:10.1038/nn.3260
Newly generated dentate granule cells in the hippocampus at 4 weeks after their 'birth' are more plastic than existing neurons. The authors use a combined retroviral and optogenetic approach to show that silencing these 4-week-old cells, but not cells of other ages, impaired retrieval of hippocampal memory.

See also: News and Views by Schoenfeld & Gould

Glucocorticoid receptors recruit the CaMKIIα-BDNF-CREB pathways to mediate memory consolidation   pp1707 - 1714
Dillon Y Chen, Dhananjay Bambah-Mukku, Gabriella Pollonini and Cristina M Alberini
doi:10.1038/nn.3266
The positive effect of stress on memory formation involves glucocorticoid receptors, but is otherwise not well understood. This article reports that stressful memory consolidation in rats involves the activation of a nongenomic molecular cascade downstream of hippocampal glucocorticoid receptors that overlaps with the BDNF-TrkB signaling pathway.

Neural population partitioning and a concurrent brain-machine interface for sequential motor function   pp1715 - 1722
Maryam M Shanechi, Rollin C Hu, Marissa Powers, Gregory W Wornell, Emery N Brown and Ziv M Williams
doi:10.1038/nn.3250
Brain-machine interfaces (BMIs) have typically focused on performing single-targeted movements. Here the authors report the presence of two subpopulations of neurons in the monkey premotor cortex that allow two planned targets to be simultaneously held in working memory without degradation. They use this finding to develop a BMI that concurrently decodes a full motor sequence in advance of movement and then accurately executes it.

Diverse types of genetic variation converge on functional gene networks involved in schizophrenia   pp1723 - 1728
Sarah R Gilman, Jonathan Chang, Bin Xu, Tejdeep S Bawa, Joseph A Gogos, Maria Karayiorgou and Dennis Vitkup
doi:10.1038/nn.3261
The authors use a computational approach (NETBAG+) to integrate and analyze diverse genetic data and apply this to study schizophrenia-associated genetic variations. They identify gene networks related to axon guidance, synaptic function, cell mobility and chromosomal remodeling.

A supramodal accumulation-to-bound signal that determines perceptual decisions in humans   pp1729 - 1735
Redmond G O'Connell, Paul M Dockree and Simon P Kelly
doi:10.1038/nn.3248
This study uses EEG in humans to isolate and track an evolving, domain-general decision signal, which varies with accumulated evidence, but is independent of overt actions.

Developmental pathways to amygdala-prefrontal function and internalizing symptoms in adolescence   pp1736 - 1741
Cory A Burghy, Diane E Stodola, Paula L Ruttle, Erin K Molloy, Jeffrey M Armstrong, Jonathan A Oler, Michelle E Fox, Andrea S Hayes, Ned H Kalin, Marilyn J Essex, Richard J Davidson and Rasmus M Birn
doi:10.1038/nn.3257
The authors assessed the contributions of early life stress (ELS) and childhood cortisol levels to adolescent resting-state functional connectivity. In females, ELS predicted increased cortisol levels in childhood, which predicted decreased amygdala-ventromedial prefrontal cortex (vmPFC) functional connectivity. Amygdala-vmPFC connectivity was inversely correlated with anxious sympotms and positively correlated with depressive symptoms.

See also: News and Views by Bogdan & Hariri

Technical Reports

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Fluorescent and photo-oxidizing TimeSTAMP tags track protein fates in light and electron microscopy   pp1742 - 1751
Margaret T Butko, Jin Yang, Yang Geng, Hyung Joon Kim, Noo Li Jeon, Xiaokun Shu, Mason R Mackey, Mark H Ellisman, Roger Y Tsien and Michael Z Lin
doi:10.1038/nn.3246
Butko and colleagues report the invention of fluorescent and photo-oxidizing versions of a molecular probe named TimeSTAMP that allows temporal tagging of newly synthesized proteins of interest. The study uses these new tools to track basal and pharmacologically-induced synthesis of the synaptic protein PDS-95 in real time via live fluorescent imaging and/or with ultrastructural resolution using electron microscopy.

A high-performance neural prosthesis enabled by control algorithm design   pp1752 - 1757
Vikash Gilja, Paul Nuyujukian, Cindy A Chestek, John P Cunningham, Byron M Yu, Joline M Fan, Mark M Churchland, Matthew T Kaufman, Jonathan C Kao, Stephen I Ryu and Krishna V Shenoy
doi:10.1038/nn.3265
Current neural prostheses can translate neural activity into control signals for guiding prosthetic devices, but poor performance limits practical application. Here the authors present a new cursor-control algorithm that approaches native arm control speed and accuracy, permits sustained uninterrupted use for hours, generalizes to more challenging tasks and provides repeatable high performance for years after implantation, thereby increasing the clinical viability of neural prostheses.

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