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2013/11/15

Nature Immunology Contents: December 2013 Volume 14 pp 1199 - 1304

Nature Immunology

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A*STAR Research - Highlighting the best of research at the Agency for Science, Technology and Research (A*STAR), Singapore's premier research organization 

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Immunology: Personalized vaccines edge closer | Genetics: Different regions, different genetic risk factors

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TABLE OF CONTENTS

December 2013 Volume 14, Issue 12

Research Highlights
Commentary
News and Views
Review
Articles
Addendum

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Professor Martin Klotz talks to us about what excites him about Microbiology, why he joined Frontiers in Microbiology as our Field Chief Editor, and where he sees the field going.

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Nature Immunology 
FOCUS ON TISSUE-RESIDENT LEUKOCYTES

Tissue-resident immune cells communicate with resident stromal cells to patrol and monitor against infection and tissue damage. Nature Immunology presents five specially commissioned Reviews that discuss interactions and functions of tissue-resident leukocytes within nonlymphoid tissues during healthy steady state, upon infection and within tumor environments. 
 

Research Highlights

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A quiet place | SNPs for disease prognosis | Help for helminths | Thymic B cells | DAG sets threshold | Zinc deprivation


Commentary

Top

Job-search basics: a scientific approach to interviewing   pp1199 - 1201
Derek Haseltine and James Gould
doi:10.1038/ni.2748
Successful interviewing can be best attributed to a combination of careful research and preparation, along with the ability to connect with employers on a personal level and demonstrate value.

News and Views

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Loss of translation: a stealth weapon against pathogens?   pp1203 - 1205
Philippe Pierre and Evelina Gatti
doi:10.1038/ni.2759
Various receptors alert cells to microbial invasion through the detection of conserved molecular patterns and initiate innate immunity. During infection with Legionella pneumophila, macrophages modulate cytokine responses by downregulating protein synthesis according to the pathogenic potential of the intruder.

See also: Article by Ivanov & Roy

Influenza vaccines: mTOR inhibition surprisingly leads to protection   pp1205 - 1207
Andrew J McMichael and Barton F Haynes
doi:10.1038/ni.2764
Mice immunized with influenza virus in the presence of rapamycin, which blocks the formation of germinal centers, make mostly IgM antibodies that protect against infection with multiple subtypes of influenza virus, including avian viruses.

See also: Article by Keating et al.

Kinases conquer the inflammasomes   pp1207 - 1208
Konstantin Neumann and Jurgen Ruland
doi:10.1038/ni.2763
Inflammasomes are signaling platforms of the innate immune system that activate proinflammatory cytokines after microbial pathogens are sensed or sterile danger is detected. The kinases Syk and Jnk control inflammasome activation by mediating phosphorylation of the inflammasome adaptor ASC.

See also: Article by Hara et al.

A HESitant decision for T cells   pp1209 - 1210
Alexandra Bortnick and Cornelis Murre
doi:10.1038/ni.2765
Precursor cells entering the thymus have non-T cell potential, yet T cell development is clearly favored. A mechanism dedicated to repressing conflicting myeloid cell fate early during the establishment of T cell identity has now been found.

See also: Article by De Obaldia et al.

Immunology
JOBS of the week
Postdoctoral Appointee - Immunology
Sandia National Laboratories
Postdoctoral fellow in mucosal immunology and microbiome
University of Colorado Anschutz Medical Campus
Postdoctoral Scientist / Immunology
New York University (NYU) Medical Center
Postdoctoral Fellow (Tumour Immunology)
National University of Singapore, Cancer Science Institute of Singapore
Assistant Profesor for an Immunology Laboratory
Hokkaido University
More Science jobs from
Immunology
EVENT
The Immunology of Ageing
24.02.14
London, UK
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Review

Top

A rheostat for immune responses: the unique properties of PD-1 and their advantages for clinical application   pp1212 - 1218
Taku Okazaki, Shunsuke Chikuma, Yoshiko Iwai, Sidonia Fagarasan and Tasuku Honjo
doi:10.1038/ni.2762

Articles

Top

Pathogen signatures activate a ubiquitination pathway that modulates the function of the metabolic checkpoint kinase mTOR   pp1219 - 1228
Stanimir S Ivanov and Craig R Roy
doi:10.1038/ni.2740
Discriminating between harmless and pathogenic bacteria is a key challenge faced by the immune system. Ivanov and Roy demonstrate that virulent bacteria disrupt mTOR signaling, which then skews responses towards inflammatory cytokine production.

See also: News and Views by Pierre & Gatti

Specification of type 2 innate lymphocytes by the transcriptional determinant Gfi1   pp1229 - 1236
Chauncey J Spooner, Justin Lesch, Donghong Yan, Aly A Khan, Alex Abbas et al.
doi:10.1038/ni.2743
Type 2 innate lymphoid cells (ILC2 cells) provide early immune responses to helminthes and contribute to allergic inflammation. Singh and colleagues show that the transcription factor Gfi1 controls the development, activation and specification of ILC2 cells.

ELF4 is critical for induction of type I interferon and the host antiviral response   pp1237 - 1246
Fuping You, Penghua Wang, Long Yang, Guang Yang, Yang O Zhao et al.
doi:10.1038/ni.2756
Induction of type I interferon is a central event of antiviral immune responses. Fikrig and colleagues show that the transcription factor ELF4 is recruited by STING and translocates to the nucleus to control transcription of type I interferon genes.

Phosphorylation of the adaptor ASC acts as a molecular switch that controls the formation of speck-like aggregates and inflammasome activity   pp1247 - 1255
Hideki Hara, Kohsuke Tsuchiya, Ikuo Kawamura, Rendong Fang, Eduardo Hernandez-Cuellar et al.
doi:10.1038/ni.2749
The adaptor ASC is required for caspase-1 activation via the NLRP3 and AIM2 inflammasomes. Mitsuyama and colleagues show that signaling dependent on the kinases Syk and Jnk controls ASC speck formation through ASC phosphorylation.

See also: News and Views by Neumann & Ruland

The HIV-1 envelope protein gp120 impairs B cell proliferation by inducing TGF-β1 production and FcRL4 expression   pp1256 - 1265
Katija Jelicic, Raffaello Cimbro, Fatima Nawaz, Da Wei Huang, Xin Zheng et al.
doi:10.1038/ni.2746
Antibody responses are impaired during HIV-1 infection. Cicala and colleagues show that the HIV-1 glycoprotein gp120 directly impairs B cell function by promoting expression of TGF-β and the inhibitory receptor FcRL4.

The kinase mTOR modulates the antibody response to provide cross-protective immunity to lethal infection with influenza virus   pp1266 - 1276
Rachael Keating, Tomer Hertz, Marie Wehenkel, Tarsha L Harris, Benjamin A Edwards et al.
doi:10.1038/ni.2741
Influenza viruses are highly variable, which complicates vaccine strategies to protect against emerging viruses. McGargill and colleagues show that blocking the mTORC1 complex skews antibody responses to more conserved epitopes, thereby producing heterosubtypic protection.

See also: News and Views by McMichael & Haynes

T cell development requires constraint of the myeloid regulator C/EBP-α by the Notch target and transcriptional repressor Hes1   pp1277 - 1284
Maria Elena De Obaldia, J Jeremiah Bell, Xinxin Wang, Christelle Harly, Yumi Yashiro-Ohtani et al.
doi:10.1038/ni.2760
Hematopoietic deficiency in the Notch target Hes1 results in severe defects in the T cell lineage. Bhandoola and colleagues show that Hes1 constrains myeloid gene-expression programs in T cell progenitors.

See also: News and Views by Bortnick & Murre

Transcriptional downregulation of S1pr1 is required for the establishment of resident memory CD8+ T cells   pp1285 - 1293
Cara N Skon, June-Yong Lee, Kristin G Anderson, David Masopust, Kristin A Hogquist et al.
doi:10.1038/ni.2745
Jameson and colleagues show that the establishment of resident memory CD8+ T cells in nonlymphoid tissues requires transcriptional downregulation of the trafficking molecule S1P1, mediated by induced loss of the transcription factor KLF2.

See also: Article by Mackay et al.

The developmental pathway for CD103+CD8+ tissue-resident memory T cells of skin   pp1294 - 1301
Laura K Mackay, Azad Rahimpour, Joel Z Ma, Nicholas Collins, Angus T Stock et al.
doi:10.1038/ni.2744
Long-lived tissue-resident memory T cells (TRM cells) confer fast, robust protection after pathogen rechallenge. Gebhardt and colleagues show that skin TRM cells arise from KLRG1- cells that differentiate in situ in response to IL-15 and TGF-β.

See also: Article by Skon et al.

Addendum

Top

IgE+ memory B cells and plasma cells generated through a germinal-center pathway   pp1302 - 1304
Oezcan Talay, Donghong Yan, Hans D Brightbill, Elizabeth E M Straney, Meijuan Zhou et al.
doi:10.1038/ni.2770

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Nature Methods 
COLLECTION ON LIGHT-SHEET MICROSCOPY 

The use of a planar sheet of light for illumination in light-sheet fluorescence microscopy allows researchers to image sample volumes faster than is possible with other current methods, while limiting light dosage. A collection of articles from Nature Methods, Nature Communications and Nature Reviews Molecular Cell Biology provides a brief overview of this exciting imaging technology and the biological research applications that it makes possible.

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