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2015/10/08

Nature Biotechnology Contents: Volume 33 pp 1009 - 1112

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Nature Biotechnology


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TABLE OF CONTENTS

October 2015 Volume 33, Issue 10

Editorials
News
Bioentrepreneur
Opinion and Comment
Features
News and Views
Computational Biology
Research
Careers and Recruitment

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Nature Microbiology: Call for Papers

Launching in January 2016, Nature Microbiology is now open for submissions and inviting high-quality submissions. The journal will cover all aspects of microorganisms be it their evolution, physiology and cell biology, their interactions with each other, with a host, with an environment, or their societal significance. 

Submit your next research paper to the journal.
 
 

Editorials

Top

Standing up for science   p1009
doi:10.1038/nbt.3384
Smear campaigns against those speaking out against scaremongering on genetically modified (GM) crops highlight why support for scientists involved in public outreach is so important.

No sample left behind   p1010
doi:10.1038/nbt.3381
Maximizing the clinical impact of immune profiling will require dedicated immune monitoring facilities and community standards for handling patient samples.

News

Top

Ebola vaccine trial falls short of homerun   pp1011 - 1012
Laura DeFrancesco
doi:10.1038/nbt1015-1011

Roche gobbles Smarticles   p1012
doi:10.1038/nbt1015-1012a

Illumina opens Helix genomics store   p1012
doi:10.1038/nbt1015-1012b

First US biosimilar launch   p1013
doi:10.1038/nbt1015-1013b

GSK collaborates with Apple on ResearchKit   pp1013 - 1014
Michael Eisenstein
doi:10.1038/nbt1015-1013a

First 3D-printed pill   p1014
doi:10.1038/nbt1015-1014a

Syngenta rebuffs Monsanto, again   p1014
doi:10.1038/nbt1015-1014b

Cat poop coffee goes biotech   p1014
doi:10.1038/nbt1015-1014c

Landmark green light for Mosquirix malaria vaccine   pp1015 - 1016
Chris Morrison
doi:10.1038/nbt1015-1015

Around the world in a month   p1016
doi:10.1038/nbt1015-1016

Kirk, to boldly go into synthetic biology   pp1017 - 1018
Emily Waltz
doi:10.1038/nbt1015-1017

News Feature

Gene drive overdrive   pp1019 - 1021
doi:10.1038/nbt.3361
The recent publication of a simple procedure for creating a CRISPR-Cas9-mediated gene drive has some researchers sounding the alarm. What are the risks to populations in the wild and what precautions are necessary? Laura DeFrancesco investigates.

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Bioentrepreneur

Top
Building a business

Philanthropy's role in translating scientific innovation   pp1022 - 1025
Hemai Parthasarathy and Lindy Fishburne
doi:10.1038/nbt.3369

Opinion and Comment

Top
Correspondence

Lessons in simplicity that should shape the future of drug delivery   pp1026 - 1027
Koen Raemdonck and Stefaan C De Smedt
doi:10.1038/nbt.3366

Professionalism and ethics in animal research   pp1027 - 1028
Nikola Biller-Andorno, Herwig Grimm and Rebecca L Walker
doi:10.1038/nbt.3363

Chinese government reaffirms backing for GM products   p1029
Rongrong Li, Qiang Wang and Alan McHughen
doi:10.1038/nbt.3362

Increased bioavailable vitamin B6 in field-grown transgenic cassava for dietary sufficiency   pp1029 - 1032
Kuan-Te Li, Michael Moulin, Nathalie Mangel, Monique Albersen, Nanda M Verhoeven-Duif et al.
doi:10.1038/nbt.3318

Features

Top
Patents

Gene patent practice across plant and human genomes   pp1033 - 1038
Osmat A Jefferson, Deniz Kollhofer, Thomas H Ehrich and Richard A Jefferson
doi:10.1038/nbt.3364
The uses of genetic sequences to inform, enable or create products or services for human biomedicine are substantially different from their uses in crop-based agriculture.

Recent patents in synthetic nucleic acids and proteins   p1039
doi:10.1038/nbt.3382

News and Views

Top

A BiTE from cancer's intracellular menu   pp1040 - 1041
Alexander I Salter and Stanley R Riddell
doi:10.1038/nbt.3370
T cells are targeted to tumor cells expressing an intracellular antigen using a bispecific antibody.

See also: Research by Dao et al.

Strain recovery from metagenomes   pp1041 - 1043
C Titus Brown
doi:10.1038/nbt.3375
Genome assembly of closely related strains present in very large metagenome data sets is enabled by a de novo pre-assembly algorithm.

See also: Computational Biology by Cleary et al.

Stabilizing prospects for a universal flu vaccine   pp1043 - 1044
doi:10.1038/nbt.3378

Research Highlights   p1044
doi:10.1038/nbt.3368

Biotechnology
JOBS of the week
Assistant Professor, Stem Cell Genomics
University of California, Santa Cruz
Postdoctoral Position Genetic Interaction Mapping
Helmholtz Association
Postdoctoral Scientist
John Innes Centre (JIC)
Post-Doc positions in Bioinformatics / Biostatistics
University of Florida
Two Postdoctoral Positions within Drug Discovery and Protein Biochemistry
University of Copenhagen
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Biotechnology
EVENT
Plant Genomes & Biotechnology: from Genes to Networks
December 2, 2015
Cold Spring Harbor, USA
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Computational Biology

Top
Analysis

ConStrains identifies microbial strains in metagenomic datasets   pp1045 - 1052
Chengwei Luo, Rob Knight, Heli Siljander, Mikael Knip, Ramnik J Xavier et al.
doi:10.1038/nbt.3319
Different bacterial strains in a metagenome are distinguished using a method that detects SNPs in conserved genes.

Detection of low-abundance bacterial strains in metagenomic datasets by eigengenome partitioning   pp1053 - 1060
Brian Cleary, Ilana Lauren Brito, Katherine Huang, Dirk Gevers, Terrance Shea et al.
doi:10.1038/nbt.3329
Bacterial strains that make up as little as 0.00001% of a microbial community are detected in metagenomic sequencing data.

See also: News and Views by Brown

Research

Top
Perspective

Systems strategies for developing industrial microbial strains   pp1061 - 1072
Sang Yup Lee and Hyun Uk Kim
doi:10.1038/nbt.3365

Brief Communications

Subangstrom single-molecule measurements of motor proteins using a nanopore   pp1073 - 1075
Ian M Derrington, Jonathan M Craig, Eric Stava, Andrew H Laszlo, Brian C Ross et al.
doi:10.1038/nbt.3357
The movement of single motor proteins on DNA is measured at subangstrom resolution using a nanopore.

Improving folate (vitamin B9) stability in biofortified rice through metabolic engineering   pp1076 - 1078
Dieter Blancquaert, Jeroen Van Daele, Simon Strobbe, Filip Kiekens, Sergei Storozhenko et al.
doi:10.1038/nbt.3358
Folate stability in stored biofortified rice is improved by complexing to folate-binding proteins.

Article

Therapeutic bispecific T-cell engager antibody targeting the intracellular oncoprotein WT1   pp1079 - 1086
Tao Dao, Dmitry Pankov, Andrew Scott, Tatyana Korontsvit, Victoriya Zakhaleva et al.
doi:10.1038/nbt.3349
A bi-specific antibody that binds both T cells and a tumor-specific intracellular antigen shows therapeutic promise in mouse models of cancer.

See also: News and Views by Salter & Riddell

Letters

De novo sequencing and variant calling with nanopores using PoreSeq   pp1087 - 1091
Tamas Szalay and Jene A Golovchenko
doi:10.1038/nbt.3360
Nanopore sequencing of microbial genomes is achieved at low coverage without a reference genome using PoreSeq.

Optogenetic control of endogenous Ca2+ channels in vivo    pp1092 - 1096
Taeyoon Kyung, Sangkyu Lee, Jung Eun Kim, Taesup Cho, Hyerim Park et al.
doi:10.1038/nbt.3350
A single-component optogenetic tool controls calcium fluxes with high dynamic range.

Engineering pulmonary vasculature in decellularized rat and human lungs   pp1097 - 1102
Xi Ren, Philipp T Moser, Sarah E Gilpin, Tatsuya Okamoto, Tong Wu et al.
doi:10.1038/nbt.3354
In a step toward bioengineered lungs, the vasculature is regenerated in decellularized rat and human lung scaffolds.

Resources

A catalog of the mouse gut metagenome   pp1103 - 1108
Liang Xiao, Qiang Feng, Suisha Liang, Si Brask Sonne, Zhongkui Xia et al.
doi:10.1038/nbt.3353
The mouse gut microbiome is catalogued and compared to the human microbiome.

Errata

Erratum: Prediction of human population responses to toxic compounds by a collaborative competition   p1109
Federica Eduati, Lara M Mangravite, Tao Wang, Hao Tang, J Christopher Bare et al.
doi:10.1038/nbt1015-1109a

Erratum: Drug pipeline: 2Q15   p1109
Laura DeFrancesco
doi:10.1038/nbt1015-1109b

Corrigendum

Corrigendum: Assembling large genomes with single-molecule sequencing and locality-sensitive hashing   p1109
Konstantin Berlin, Sergey Koren, Chen-Shan Chin, James P Drake, Jane M Landolin et al.
doi:10.1038/nbt1015-1109c

Careers and Recruitment

Top

The right track for you in biotech and biomedical sciences   pp1110 - 1111
Laxmi Ravi Iyer and Sandhya Sriram
doi:10.1038/nbt.3376
In Singapore, a recent panel showcased the many career paths and options available for those in the biotech sector.

People

People   p1112
doi:10.1038/nbt.3379

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Nature Plants: Call for Papers

Nature Plants
launched in January and covers all aspects of plants be it their evolution, genetics, development or metabolism, their interactions with the environment, or their societal significance. The journal welcomes high quality submissions and encourages you and your colleagues to consider submitting your next research paper to the journal. 

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