Scientific Reports Table of Contents e-alert: 28 May 2013

28 May 2013      • Visit Scientific Reports • Submit your manuscript to Scientific Reports     Welcome to your Table of Contents e-alert for Scientific Reports                 Ludwig Institute for Cancer Research, Nature Genetics, and Nature Reviews Cancer present: Nuclear Reprogramming and the Cancer Genome St. Catherine's College, University of Oxford, Oxford, UK September 25-27, 2013 Click here for more information or to register for this conference!               Jump to the content that matters to you ▼ Biological Sciences   ▼ Chemical Sciences   ▼ Physical Sciences   ▼ Earth & Environmental Sciences   ▼ Health Sciences           Biological Sciences ▲ top               Chemical activation of RARβ induces post-embryonically bilateral limb duplication during Xenopus limb regeneration ▶     Rodrigo Cuervo, Jesús Chimal-Monroy     The anuran amphibian Xenopus laevis can regenerate its limbs for a limited time during the larval stage, while limbs are still developing. Using this regeneration model, we …             Temporal fractals in seabird foraging behaviour: diving through the scales of time ▶     Andrew J. J. MacIntosh, Laure Pelletier, Andre Chiaradia et al.     Animal behaviour exhibits fractal structure in space and time. Fractal properties in animal space-use have been explored extensively under the Lévy flight foraging hypothesis, but …             Addressable and unidirectional energy transfer along a DNA three-way junction programmed by pyrrole-imidazole polyamides ▶     Wu Su, Clive R. Bagshaw, Glenn A. Burley     We describe a photonic waveguide where FRET is routed uni-directionally along a double-stranded DNA track. The efficiency of FRET is modulated by the supramolecular control of …             Attachment-regulated signaling networks in the fibroblast-populated 3D collagen matrix ▶     Mark A. Carlson, Lynette M. Smith, Crystal M. Cordes et al.     Fibroblasts in the attached collagen matrix are in a pro-survival, pro-proliferative state relative to fibroblasts in the released collagen matrix, such that matrix cell number …             Measuring collective cell movement and extracellular matrix interactions using magnetic resonance imaging ▶     Yun Chen, Stephen J. Dodd, Michael A. Tangrea et al.     Collective cell behaviors in migration and force generation were studied at the mesoscopic-level using cells grown in a 3D extracellular matrix (ECM) simulating tissues. Magnetic …             Memory of plant communications for priming anti-herbivore responses ▶     Mohamed Ali, Koichi Sugimoto, Abdelaziz Ramadan et al.     The emission of a specific blend of volatiles in response to Mythimna separata (herbivore-induced plant volatiles, HIPVs) plays a great ecological role by priming neighbouring …             Metagenomic analysis of the pinewood nematode microbiome reveals a symbiotic relationship critical for xenobiotics degradation ▶     Xin-Yue Cheng, Xue-Liang Tian, Yun-Sheng Wang et al.     Our recent research revealed that pinewood nematode (PWN) possesses few genes encoding enzymes for degrading α-pinene, which is the main compound in pine resin. In this study, we …             Basilar membrane vibration is not involved in the reverse propagation of otoacoustic emissions ▶     W. He, T. Ren     To understand how the inner ear-generated sound, i.e., otoacoustic emission, exits the cochlea, we created a sound source electrically in the second turn and measured basilar …             Leaf Selection by Two Bornean Colobine Monkeys in Relation to Plant Chemistry and Abundance ▶     Ikki Matsuda, Augustine Tuuga, Henry Bernard et al.     Focusing on the chemical basis of dietary selection while investigating the nutritional ecology of animals helps understand their feeding biology. It is also important to consider …             Mesothelin Binding to CA125/MUC16 Promotes Pancreatic Cancer Cell Motility and Invasion via MMP-7 Activation ▶     Shih-Hsun Chen, Wei-Chien Hung, Pu Wang et al.     Mesothelin (MSLN) and cancer antigen125/mucin 16 (CA125/MUC16) are potential biomarkers for pancreatic cancer (PC) that are co-overexpressed at the invading edges of PC tissues, and …             Rapid single cell detection of Staphylococcus aureus by aptamer-conjugated gold nanoparticles ▶     Yi-Chung Chang, Chia-Ying Yang, Ruei-Lin Sun et al.     Staphylococcus aureus is one of the most important human pathogens, causing more than 500,000 infections in the United States each year. Traditional methods for bacterial culture …             A Novel Electrochemical Membrane Bioreactor as a Potential Net Energy Producer for Sustainable Wastewater Treatment ▶     Yun-Kun Wang, Guo-Ping Sheng, Bing-Jing Shi et al.     One possible way to address both water and energy shortage issues, the two of major global challenges, is to recover energy and water resource from wastewater. Herein, a novel …             IRGM1 regulates oxidized LDL uptake by macrophage via actin-dependent receptor internalization during atherosclerosis ▶     Fucan Xia, Rui Li, Chaodong Wang et al.     Macrophage derived foam cells are actively involved in the initial phase of atherosclerosis. Uptake of modified lipoprotein such as oxidized LDL (oxLDL) is a critical step for foam …             Plasmon-Enhanced Light Harvesting of Chlorophylls on Near-Percolating Silver Films via One-Photon Anti-Stokes Upconversion ▶     Ya-Lan Wang, Fan Nan, Xiao-Li Liu et al.     There exists a wealth of means of efficient utilization of solar energy in nature, with photosynthesis of chlorophylls as a prime example. Separately, artificially structured …                         Scientific Reports is accepting submissions from all scientific fields. Submit your manuscript now.               Chemical Sciences ▲ top               Addressable and unidirectional energy transfer along a DNA three-way junction programmed by pyrrole-imidazole polyamides ▶     Wu Su, Clive R. Bagshaw, Glenn A. Burley     We describe a photonic waveguide where FRET is routed uni-directionally along a double-stranded DNA track. The efficiency of FRET is modulated by the supramolecular control of …             Low-temperature muon spin rotation studies of the monopole charges and currents in Y doped Ho2Ti2O7 ▶     L. J. Chang, M. R. Lees, G. Balakrishnan et al.     In the ground state of Ho2Ti2O7 spin ice, the disorder of the magnetic moments follows the same rules as the proton disorder in water ice. Excitations take the form of magnetic …             The R3-carbon allotrope: a pathway towards glassy carbon under high pressure ▶     Xue Jiang, Cecilia Århammar, Peng Liu et al.     Pressure-induced bond type switching and phase transformation in glassy carbon (GC) has been simulated by means of Density Functional Theory (DFT) calculations and the Stochastic …             Hydroxylated derivatives of dimethoxy-1,4-benzoquinone as redox switchable earth-alkaline metal ligands and radical scavengers ▶     Rubin Gulaboski, Ivan Bogeski, Valentin Mirčeski et al.     Benzoquinones (BQ) have important functions in many biological processes. In alkaline environments, BQs can be hydroxylated at quinoid ring proton positions. Very little is known …             Controlled Scalable Synthesis of Uniform, High-Quality Monolayer and Few-layer MoS2 Films ▶     Yifei Yu, Chun Li, Yi Liu et al.     Two dimensional (2D) materials with a monolayer of atoms represent an ultimate control of material dimension in the vertical direction. Molybdenum sulfide (MoS2) monolayers, with …                 Physical Sciences ▲ top               Parametric Amplification and Cascaded-Nonlinearity Processes in Common Atomic System ▶     Huaibin Zheng, Xun Zhang, Zhaoyang Zhang et al.     For the first time, we study the parametric amplification process of multi-wave mixing (PA-MWM) signal and cascaded-nonlinearity process (CNP) in sodium vapors both theoretically …             Addressable and unidirectional energy transfer along a DNA three-way junction programmed by pyrrole-imidazole polyamides ▶     Wu Su, Clive R. Bagshaw, Glenn A. Burley     We describe a photonic waveguide where FRET is routed uni-directionally along a double-stranded DNA track. The efficiency of FRET is modulated by the supramolecular control of …             Temporal fractals in seabird foraging behaviour: diving through the scales of time ▶     Andrew J. J. MacIntosh, Laure Pelletier, Andre Chiaradia et al.     Animal behaviour exhibits fractal structure in space and time. Fractal properties in animal space-use have been explored extensively under the Lévy flight foraging hypothesis, but …             Low-temperature muon spin rotation studies of the monopole charges and currents in Y doped Ho2Ti2O7 ▶     L. J. Chang, M. R. Lees, G. Balakrishnan et al.     In the ground state of Ho2Ti2O7 spin ice, the disorder of the magnetic moments follows the same rules as the proton disorder in water ice. Excitations take the form of magnetic …             Non-volatile ferroelastic switching of the Verwey transition and resistivity of epitaxial Fe3O4/PMN-PT (011) ▶     Ming Liu, Jason Hoffman, Jing Wang et al.     A central goal of electronics based on correlated materials or ‘Mottronics’ is the ability to switch between distinct collective states with a control voltage. Small changes in …             The R3-carbon allotrope: a pathway towards glassy carbon under high pressure ▶     Xue Jiang, Cecilia Århammar, Peng Liu et al.     Pressure-induced bond type switching and phase transformation in glassy carbon (GC) has been simulated by means of Density Functional Theory (DFT) calculations and the Stochastic …             Three-dimensional metal-intercalated covalent organic frameworks for near-ambient energy storage ▶     Fei Gao, Zijing Ding, Sheng Meng     A new form of nanoporous material, metal intercalated covalent organic framework (MCOF) is proposed and its energy storage property revealed. Employing density functional and …             The strange flight behaviour of slowly spinning soccer balls ▶     Taketo Mizota, Kouhei Kurogi, Yuji Ohya et al.     The strange three-dimensional flight behaviour of slowly spinning soccer balls is one of the most interesting and unknown phenomenon associated with the trajectories of sports …             Controlled Scalable Synthesis of Uniform, High-Quality Monolayer and Few-layer MoS2 Films ▶     Yifei Yu, Chun Li, Yi Liu et al.     Two dimensional (2D) materials with a monolayer of atoms represent an ultimate control of material dimension in the vertical direction. Molybdenum sulfide (MoS2) monolayers, with …             Hydroxylated derivatives of dimethoxy-1,4-benzoquinone as redox switchable earth-alkaline metal ligands and radical scavengers ▶     Rubin Gulaboski, Ivan Bogeski, Valentin Mirčeski et al.     Benzoquinones (BQ) have important functions in many biological processes. In alkaline environments, BQs can be hydroxylated at quinoid ring proton positions. Very little is known …             Under-water superoleophobic Glass: Unexplored role of the surfactant-rich solvent ▶     Prashant R. Waghmare, Siddhartha Das, Sushanta K. Mitra     Preparing low energy liquid-repellant surfaces (superhydrophobic or superoleophobic) have attracted tremendous attention of late. In all these studies, the necessary liquid …             Plasmon-Enhanced Light Harvesting of Chlorophylls on Near-Percolating Silver Films via One-Photon Anti-Stokes Upconversion ▶     Ya-Lan Wang, Fan Nan, Xiao-Li Liu et al.     There exists a wealth of means of efficient utilization of solar energy in nature, with photosynthesis of chlorophylls as a prime example. Separately, artificially structured …               Earth & Environmental Sciences ▲ top               Only 5 southern Greenland shelf edge glaciations since the early Pliocene ▶     Tove Nielsen, Antoon Kuijpers     Much uncertainty exists about the history of the Greenland Ice Sheet (GIS), particularly as to the frequency of extreme shelf edge glaciations. Because the last glaciation removed …             A Novel Electrochemical Membrane Bioreactor as a Potential Net Energy Producer for Sustainable Wastewater Treatment ▶     Yun-Kun Wang, Guo-Ping Sheng, Bing-Jing Shi et al.     One possible way to address both water and energy shortage issues, the two of major global challenges, is to recover energy and water resource from wastewater. Herein, a novel …               Health Sciences ▲ top               Kidney tubular β-catenin signaling controls interstitial fibroblast fate via epithelial-mesenchymal communication ▶     Dong Zhou, Roderick J. Tan, Lili Zhou et al.     Activation of β-catenin, the principal mediator of canonical Wnt signaling, is a common pathologic finding in a wide variety of chronic kidney diseases (CKD). While β-catenin is …             IRGM1 regulates oxidized LDL uptake by macrophage via actin-dependent receptor internalization during atherosclerosis ▶     Fucan Xia, Rui Li, Chaodong Wang et al.     Macrophage derived foam cells are actively involved in the initial phase of atherosclerosis. Uptake of modified lipoprotein such as oxidized LDL (oxLDL) is a critical step for foam …             Rapid single cell detection of Staphylococcus aureus by aptamer-conjugated gold nanoparticles ▶     Yi-Chung Chang, Chia-Ying Yang, Ruei-Lin Sun et al.     Staphylococcus aureus is one of the most important human pathogens, causing more than 500,000 infections in the United States each year. 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