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2014/03/18

The ISME Journal - Table of Contents alert Volume 8 Issue 4

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The ISME Journal

TABLE OF CONTENTS

Volume 8, Issue 4 (April 2014)

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Original Articles
Corrigenda

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Original Articles

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MICROBIAL POPULATION AND COMMUNITY ECOLOGY

Using environmental niche models to test the ‘everything is everywhere’ hypothesis for Badhamia

María Aguilar, Anna-Maria Fiore-Donno, Carlos Lado and Thomas Cavalier-Smith

ISME J 2014 8: 737-745; advance online publication, October 17, 2013; 10.1038/ismej.2013.183

Abstract | Full Text

Microevolution of Renibacterium salmoninarum: evidence for intercontinental dissemination associated with fish movements OPEN

Ola Brynildsrud, Edward J Feil, Jon Bohlin, Santiago Castillo-Ramirez, Duncan Colquhoun, Una McCarthy, Iveta M Matejusova, Linda D Rhodes, Gregory D Wiens and David W Verner-Jeffreys

ISME J 2014 8: 746-756; advance online publication, October 31, 2013; 10.1038/ismej.2013.186

Abstract | Full Text

Single-cell genome and metatranscriptome sequencing reveal metabolic interactions of an alkane-degrading methanogenic community

Mallory Embree, Harish Nagarajan, Narjes Movahedi, Hamidreza Chitsaz and Karsten Zengler

ISME J 2014 8: 757-767; advance online publication, October 24, 2013; 10.1038/ismej.2013.187

Abstract | Full Text

Quantitative and qualitative impact of hospital effluent on dissemination of the integron pool

Thibault Stalder, Olivier Barraud, Thomas Jové, Magali Casellas, Margaux Gaschet, Christophe Dagot and Marie- Cécile Ploy

ISME J 2014 8: 768-777; advance online publication, October 24, 2013; 10.1038/ismej.2013.189

Abstract | Full Text

Modular community structure suggests metabolic plasticity during the transition to polar night in ice-covered Antarctic lakes

Trista J Vick-Majors, John C Priscu and Linda A Amaral-Zettler

ISME J 2014 8: 778-789; advance online publication, October 24, 2013; 10.1038/ismej.2013.190

Abstract | Full Text

Rhizosphere microbiome assemblage is affected by plant development

Jacqueline M Chaparro, Dayakar V Badri and Jorge M Vivanco

ISME J 2014 8: 790-803; advance online publication, November 7, 2013; 10.1038/ismej.2013.196

Abstract | Full Text

Ecological succession among iron-oxidizing bacteria

Emily J Fleming, Ivona Cetinić, Clara S Chan, D Whitney King and David Emerson

ISME J 2014 8: 804-815; advance online publication, November 14, 2013; 10.1038/ismej.2013.197

Abstract | Full Text

Top-down controls on bacterial community structure: microbial network analysis of bacteria, T4-like viruses and protists

Cheryl-Emiliane T Chow, Diane Y Kim, Rohan Sachdeva, David A Caron and Jed A Fuhrman

ISME J 2014 8: 816-829; advance online publication, November 7, 2013; 10.1038/ismej.2013.199

Abstract | Full Text

Microbial community dynamics and effect of environmental microbial reservoirs on red-backed salamanders (Plethodon cinereus) OPEN

Andrew H Loudon, Douglas C Woodhams, Laura Wegener Parfrey, Holly Archer, Rob Knight, Valerie McKenzie and Reid N Harris

ISME J 2014 8: 830-840; advance online publication, December 12, 2013; 10.1038/ismej.2013.200

Abstract | Full Text

Distinct microbial communities associated with buried soils in the Siberian tundra

Antje Gittel, Jiří Bárta, Iva Kohoutová, Robert Mikutta, Sarah Owens, Jack Gilbert, Jörg Schnecker, Birgit Wild, Bjarte Hannisdal, Joeran Maerz, Nikolay Lashchinskiy, Petr Čapek, Hana Šantrůčková, Norman Gentsch, Olga Shibistova, Georg Guggenberger, Andreas Richter, Vigdis L Torsvik, Christa Schleper and Tim Urich

ISME J 2014 8: 841-853; advance online publication, December 12, 2013; 10.1038/ismej.2013.219

Abstract | Full Text

Exploring the uncultured microeukaryote majority in the oceans: reevaluation of ribogroups within stramenopiles

Ramon Massana, Javier del Campo, Michael E Sieracki, Stéphane Audic and Ramiro Logares

ISME J 2014 8: 854-866; advance online publication, November 7, 2013; 10.1038/ismej.2013.204

Abstract | Full Text

Strain-level genomic variation in natural populations of Lebetimonas from an erupting deep-sea volcano

Julie L Meyer and Julie A Huber

ISME J 2014 8: 867-880; advance online publication, November 21, 2013; 10.1038/ismej.2013.206

Abstract | Full Text

MICROBE-MICROBE AND MICROBE-HOST INTERACTIONS

Spatial heterogeneity and co-occurrence patterns of human mucosal-associated intestinal microbiota

Zhigang Zhang, Jiawei Geng, Xiaodan Tang, Hong Fan, Jinchao Xu, Xiujun Wen, Zhanshan (Sam) Ma and Peng Shi

ISME J 2014 8: 881-893; advance online publication, October 17, 2013; 10.1038/ismej.2013.185

Abstract | Full Text

Biofilm development and enhanced stress resistance of a model, mixed-species community biofilm

Kai Wei Kelvin Lee, Saravanan Periasamy, Manisha Mukherjee, Chao Xie, Staffan Kjelleberg and Scott A Rice

ISME J 2014 8: 894-907; advance online publication, October 24, 2013; 10.1038/ismej.2013.194

Abstract | Full Text

Genomic versatility and functional variation between two dominant heterotrophic symbionts of deep-sea Osedax worms

Shana K Goffredi, Hana Yi, Qingpeng Zhang, Jane E Klann, Isabelle A Struve, Robert C Vrijenhoek and C Titus Brown

ISME J 2014 8: 908-924; advance online publication, November 14, 2013; 10.1038/ismej.2013.201

Abstract | Full Text

INTEGRATED GENOMICS AND POST-GENOMICS APPROACHES IN MICROBIAL ECOLOGY

Integrated transcriptomic and proteomic analysis of the global response of Wolbachia to doxycycline-induced stress OPEN

Alistair C Darby, A Christina Gill, Stuart D Armstrong, Catherine S Hartley, Dong Xia, Jonathan M Wastling and Benjamin L Makepeace

ISME J 2014 8: 925-937; advance online publication, October 24, 2013; 10.1038/ismej.2013.192

Abstract | Full Text

MICROBIAL ECOLOGY AND FUNCTIONAL DIVERSITY OF NATURAL HABITATS

Niche specialization of novel Thaumarchaeota to oxic and hypoxic acidic geothermal springs of Yellowstone National Park

Jacob P Beam, Zackary J Jay, Mark A Kozubal and William P Inskeep

ISME J 2014 8: 938-951; advance online publication, November 7, 2013; 10.1038/ismej.2013.193

Abstract | Full Text

Corrigenda

Top

Evidence for successional development in Antarctic hypolithic bacterial communities

Thulani P Makhalanyane, Angel Valverde, Nils-Kåre Birkeland, Stephen C Cary, I Marla Tuffin and Don A Cowan

ISME J 2014 8: 952; 10.1038/ismej.2013.230

Full Text

Using network analysis to explore co-occurrence patterns in soil microbial communities

Albert Barberán, Scott T Bates, Emilio O Casamayor and Noah Fierer

ISME J 2014 8: 952; 10.1038/ismej.2013.236

Full Text

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